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|---|---|---|---|
| 1 | // Copyright Contributors to the OpenVDB Project | ||
| 2 | // SPDX-License-Identifier: MPL-2.0 | ||
| 3 | /// | ||
| 4 | /// @file Diagnostics.h | ||
| 5 | /// | ||
| 6 | /// @author Ken Museth | ||
| 7 | /// | ||
| 8 | /// @brief Various diagnostic tools to identify potential issues with | ||
| 9 | /// for example narrow-band level sets or fog volumes | ||
| 10 | /// | ||
| 11 | #ifndef OPENVDB_TOOLS_DIAGNOSTICS_HAS_BEEN_INCLUDED | ||
| 12 | #define OPENVDB_TOOLS_DIAGNOSTICS_HAS_BEEN_INCLUDED | ||
| 13 | |||
| 14 | #include "openvdb/Grid.h" | ||
| 15 | #include "openvdb/math/Math.h" | ||
| 16 | #include "openvdb/math/Vec3.h" | ||
| 17 | #include "openvdb/math/Stencils.h" | ||
| 18 | #include "openvdb/math/Operators.h" | ||
| 19 | #include "openvdb/tree/LeafManager.h" | ||
| 20 | #include "openvdb/thread/Threading.h" | ||
| 21 | #include <openvdb/openvdb.h> | ||
| 22 | |||
| 23 | #include <tbb/blocked_range.h> | ||
| 24 | #include <tbb/parallel_reduce.h> | ||
| 25 | |||
| 26 | #include <cmath> // for std::isnan(), std::isfinite() | ||
| 27 | #include <set> | ||
| 28 | #include <sstream> | ||
| 29 | #include <string> | ||
| 30 | #include <type_traits> | ||
| 31 | #include <vector> | ||
| 32 | |||
| 33 | namespace openvdb { | ||
| 34 | OPENVDB_USE_VERSION_NAMESPACE | ||
| 35 | namespace OPENVDB_VERSION_NAME { | ||
| 36 | namespace tools { | ||
| 37 | |||
| 38 | //////////////////////////////////////////////////////////////////////////////// | ||
| 39 | |||
| 40 | /// @brief Perform checks on a grid to see if it is a valid symmetric, | ||
| 41 | /// narrow-band level set. | ||
| 42 | /// | ||
| 43 | /// @param grid Grid to be checked | ||
| 44 | /// @param number Number of the checks to be performed (see below) | ||
| 45 | /// @return string with a message indicating the nature of the | ||
| 46 | /// issue. If no issue is detected the return string is empty. | ||
| 47 | /// | ||
| 48 | /// @details @a number refers to the following ordered list of | ||
| 49 | /// checks - always starting from the top. | ||
| 50 | /// Fast checks | ||
| 51 | /// 1: value type is floating point | ||
| 52 | /// 2: has level set class type | ||
| 53 | /// 3: has uniform scale | ||
| 54 | /// 4: background value is positive and n*dx | ||
| 55 | /// | ||
| 56 | /// Slower checks | ||
| 57 | /// 5: no active tiles | ||
| 58 | /// 6: all the values are finite, i.e not NaN or infinite | ||
| 59 | /// 7: active values in range between +-background | ||
| 60 | /// 8: abs of inactive values = background, i.e. assuming a symmetric | ||
| 61 | /// narrow band! | ||
| 62 | /// | ||
| 63 | /// Relatively slow check (however multithreaded) | ||
| 64 | /// 9: norm gradient is close to one, i.e. satisfied the Eikonal equation. | ||
| 65 | template<class GridType> | ||
| 66 | std::string | ||
| 67 | checkLevelSet(const GridType& grid, size_t number=9); | ||
| 68 | |||
| 69 | //////////////////////////////////////////////////////////////////////////////// | ||
| 70 | |||
| 71 | /// @brief Perform checks on a grid to see if it is a valid fog volume. | ||
| 72 | /// | ||
| 73 | /// @param grid Grid to be checked | ||
| 74 | /// @param number Number of the checks to be performed (see below) | ||
| 75 | /// @return string with a message indicating the nature of the | ||
| 76 | /// issue. If no issue is detected the return string is empty. | ||
| 77 | /// | ||
| 78 | /// @details @a number refers to the following ordered list of | ||
| 79 | /// checks - always starting from the top. | ||
| 80 | /// Fast checks | ||
| 81 | /// 1: value type is floating point | ||
| 82 | /// 2: has FOG volume class type | ||
| 83 | /// 3: background value is zero | ||
| 84 | /// | ||
| 85 | /// Slower checks | ||
| 86 | /// 4: all the values are finite, i.e not NaN or infinite | ||
| 87 | /// 5: inactive values are zero | ||
| 88 | /// 6: active values are in the range [0,1] | ||
| 89 | template<class GridType> | ||
| 90 | std::string | ||
| 91 | checkFogVolume(const GridType& grid, size_t number=6); | ||
| 92 | |||
| 93 | //////////////////////////////////////////////////////////////////////////////// | ||
| 94 | |||
| 95 | /// @brief Threaded method to find unique inactive values. | ||
| 96 | /// | ||
| 97 | /// @param grid A VDB volume. | ||
| 98 | /// @param values List of unique inactive values, returned by this method. | ||
| 99 | /// @param numValues Number of values to look for. | ||
| 100 | /// @return @c false if the @a grid has more than @a numValues inactive values. | ||
| 101 | template<class GridType> | ||
| 102 | bool | ||
| 103 | uniqueInactiveValues(const GridType& grid, | ||
| 104 | std::vector<typename GridType::ValueType>& values, size_t numValues); | ||
| 105 | |||
| 106 | |||
| 107 | //////////////////////////////////////////////////////////////////////////////// | ||
| 108 | |||
| 109 | /// @brief Checks NaN values | ||
| 110 | template<typename GridT, typename TreeIterT = typename GridT::ValueOnCIter> | ||
| 111 | struct CheckNan | ||
| 112 | { | ||
| 113 | using ElementType = typename VecTraits<typename GridT::ValueType>::ElementType; | ||
| 114 | using TileIterT = TreeIterT; | ||
| 115 | using VoxelIterT = typename tree::IterTraits< | ||
| 116 | typename TreeIterT::NodeT, typename TreeIterT::ValueIterT>::template | ||
| 117 | NodeConverter<typename GridT::TreeType::LeafNodeType>::Type; | ||
| 118 | |||
| 119 | /// @brief Default constructor | ||
| 120 | CheckNan() {} | ||
| 121 | |||
| 122 | /// Return true if the scalar value is NaN | ||
| 123 |
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3 | inline bool operator()(const ElementType& v) const { return std::isnan(v); } |
| 124 | |||
| 125 | /// @brief This allows for vector values to be checked component-wise | ||
| 126 | template<typename T> | ||
| 127 | inline typename std::enable_if<VecTraits<T>::IsVec, bool>::type | ||
| 128 | 1 | operator()(const T& v) const | |
| 129 | { | ||
| 130 |
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4 | for (int i=0; i<VecTraits<T>::Size; ++i) if ((*this)(v[i])) return true;//should unroll |
| 131 | return false; | ||
| 132 | } | ||
| 133 | |||
| 134 | /// @brief Return true if the tile at the iterator location is NaN | ||
| 135 | bool operator()(const TreeIterT &iter) const { return (*this)(*iter); } | ||
| 136 | |||
| 137 | /// @brief Return true if the voxel at the iterator location is NaN | ||
| 138 | bool operator()(const VoxelIterT &iter) const { return (*this)(*iter); } | ||
| 139 | |||
| 140 | /// @brief Return a string describing a failed check. | ||
| 141 |
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1 | std::string str() const { return "NaN"; } |
| 142 | |||
| 143 | };// CheckNan | ||
| 144 | |||
| 145 | //////////////////////////////////////////////////////////////////////////////// | ||
| 146 | |||
| 147 | /// @brief Checks for infinite values, e.g. 1/0 or -1/0 | ||
| 148 | template <typename GridT, | ||
| 149 | typename TreeIterT = typename GridT::ValueOnCIter> | ||
| 150 | struct CheckInf | ||
| 151 | { | ||
| 152 | using ElementType = typename VecTraits<typename GridT::ValueType>::ElementType; | ||
| 153 | using TileIterT = TreeIterT; | ||
| 154 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 155 | typename TreeIterT::ValueIterT> ::template NodeConverter< | ||
| 156 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 157 | |||
| 158 | /// @brief Default constructor | ||
| 159 | CheckInf() {} | ||
| 160 | |||
| 161 | /// Return true if the value is infinite | ||
| 162 | inline bool operator()(const ElementType& v) const { return std::isinf(v); } | ||
| 163 | |||
| 164 | /// Return true if any of the vector components are infinite. | ||
| 165 | template<typename T> | ||
| 166 | inline typename std::enable_if<VecTraits<T>::IsVec, bool>::type | ||
| 167 | 1 | operator()(const T& v) const | |
| 168 | { | ||
| 169 |
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3 | for (int i=0; i<VecTraits<T>::Size; ++i) if ((*this)(v[i])) return true; |
| 170 | return false; | ||
| 171 | } | ||
| 172 | |||
| 173 | /// @brief Return true if the tile at the iterator location is infinite | ||
| 174 | bool operator()(const TreeIterT &iter) const { return (*this)(*iter); } | ||
| 175 | |||
| 176 | /// @brief Return true if the tile at the iterator location is infinite | ||
| 177 | bool operator()(const VoxelIterT &iter) const { return (*this)(*iter); } | ||
| 178 | |||
| 179 | /// @brief Return a string describing a failed check. | ||
| 180 | std::string str() const { return "infinite"; } | ||
| 181 | };// CheckInf | ||
| 182 | |||
| 183 | //////////////////////////////////////////////////////////////////////////////// | ||
| 184 | |||
| 185 | /// @brief Checks for both NaN and inf values, i.e. any value that is not finite. | ||
| 186 | template <typename GridT, | ||
| 187 | typename TreeIterT = typename GridT::ValueOnCIter> | ||
| 188 | struct CheckFinite | ||
| 189 | { | ||
| 190 | using ElementType = typename VecTraits<typename GridT::ValueType>::ElementType; | ||
| 191 | using TileIterT = TreeIterT; | ||
| 192 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 193 | typename TreeIterT::ValueIterT> ::template NodeConverter< | ||
| 194 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 195 | |||
| 196 | /// @brief Default constructor | ||
| 197 | CheckFinite() {} | ||
| 198 | |||
| 199 | /// Return true if the value is NOT finite, i.e. it's NaN or infinite | ||
| 200 |
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2402884 | inline bool operator()(const ElementType& v) const { return !std::isfinite(v); } |
| 201 | |||
| 202 | /// Return true if any of the vector components are NaN or infinite. | ||
| 203 | template<typename T> | ||
| 204 | inline typename std::enable_if<VecTraits<T>::IsVec, bool>::type | ||
| 205 | 1 | operator()(const T& v) const { | |
| 206 |
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3 | for (int i=0; i<VecTraits<T>::Size; ++i) if ((*this)(v[i])) return true; |
| 207 | return false; | ||
| 208 | } | ||
| 209 | |||
| 210 | /// @brief Return true if the tile at the iterator location is NaN or infinite. | ||
| 211 | bool operator()(const TreeIterT &iter) const { return (*this)(*iter); } | ||
| 212 | |||
| 213 | /// @brief Return true if the tile at the iterator location is NaN or infinite. | ||
| 214 | bool operator()(const VoxelIterT &iter) const { return (*this)(*iter); } | ||
| 215 | |||
| 216 | /// @brief Return a string describing a failed check. | ||
| 217 |
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1 | std::string str() const { return "not finite"; } |
| 218 | };// CheckFinite | ||
| 219 | |||
| 220 | //////////////////////////////////////////////////////////////////////////////// | ||
| 221 | |||
| 222 | /// @brief Check that the magnitude of a value, a, is close to a fixed | ||
| 223 | /// magnitude, b, given a fixed tolerance c. That is | |a| - |b| | <= c | ||
| 224 | template <typename GridT, | ||
| 225 | typename TreeIterT = typename GridT::ValueOffCIter> | ||
| 226 | struct CheckMagnitude | ||
| 227 | { | ||
| 228 | using ElementType = typename VecTraits<typename GridT::ValueType>::ElementType; | ||
| 229 | using TileIterT = TreeIterT; | ||
| 230 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 231 | typename TreeIterT::ValueIterT> ::template NodeConverter< | ||
| 232 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 233 | |||
| 234 | /// @brief Default constructor | ||
| 235 | 5 | CheckMagnitude(const ElementType& a, | |
| 236 | const ElementType& t = math::Tolerance<ElementType>::value()) | ||
| 237 |
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2 | : absVal(math::Abs(a)), tolVal(math::Abs(t)) |
| 238 | { | ||
| 239 | } | ||
| 240 | |||
| 241 | /// Return true if the magnitude of the value is not approximately | ||
| 242 | /// equal to totVal. | ||
| 243 | inline bool operator()(const ElementType& v) const | ||
| 244 | { | ||
| 245 |
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1190894 | return math::Abs(math::Abs(v) - absVal) > tolVal; |
| 246 | } | ||
| 247 | |||
| 248 | /// Return true if any of the vector components are infinite. | ||
| 249 | template<typename T> | ||
| 250 | inline typename std::enable_if<VecTraits<T>::IsVec, bool>::type | ||
| 251 | operator()(const T& v) const | ||
| 252 | { | ||
| 253 | for (int i=0; i<VecTraits<T>::Size; ++i) if ((*this)(v[i])) return true; | ||
| 254 | return false; | ||
| 255 | } | ||
| 256 | |||
| 257 | /// @brief Return true if the tile at the iterator location is infinite | ||
| 258 | bool operator()(const TreeIterT &iter) const { return (*this)(*iter); } | ||
| 259 | |||
| 260 | /// @brief Return true if the tile at the iterator location is infinite | ||
| 261 | bool operator()(const VoxelIterT &iter) const { return (*this)(*iter); } | ||
| 262 | |||
| 263 | /// @brief Return a string describing a failed check. | ||
| 264 | ✗ | std::string str() const | |
| 265 | { | ||
| 266 | ✗ | std::ostringstream ss; | |
| 267 | ✗ | ss << "not equal to +/-"<<absVal<<" with a tolerance of "<<tolVal; | |
| 268 | ✗ | return ss.str(); | |
| 269 | } | ||
| 270 | |||
| 271 | const ElementType absVal, tolVal; | ||
| 272 | };// CheckMagnitude | ||
| 273 | |||
| 274 | //////////////////////////////////////////////////////////////////////////////// | ||
| 275 | |||
| 276 | /// @brief Checks a value against a range | ||
| 277 | template <typename GridT, | ||
| 278 | bool MinInclusive = true,//is min part of the range? | ||
| 279 | bool MaxInclusive = true,//is max part of the range? | ||
| 280 | typename TreeIterT = typename GridT::ValueOnCIter> | ||
| 281 | struct CheckRange | ||
| 282 | { | ||
| 283 | using ElementType = typename VecTraits<typename GridT::ValueType>::ElementType; | ||
| 284 | using TileIterT = TreeIterT; | ||
| 285 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 286 | typename TreeIterT::ValueIterT> ::template NodeConverter< | ||
| 287 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 288 | |||
| 289 | // @brief Constructor taking a range to be tested against. | ||
| 290 | 28 | CheckRange(const ElementType& _min, const ElementType& _max) : minVal(_min), maxVal(_max) | |
| 291 | { | ||
| 292 |
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28 | if (minVal > maxVal) { |
| 293 |
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8 | OPENVDB_THROW(ValueError, "CheckRange: Invalid range (min > max)"); |
| 294 | } | ||
| 295 | 26 | } | |
| 296 | |||
| 297 | /// Return true if the value is smaller than min or larger than max. | ||
| 298 | inline bool operator()(const ElementType& v) const | ||
| 299 | { | ||
| 300 |
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1637213 | return (MinInclusive ? v<minVal : v<=minVal) || |
| 301 |
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1548912 | (MaxInclusive ? v>maxVal : v>=maxVal); |
| 302 | } | ||
| 303 | |||
| 304 | /// Return true if any of the vector components are out of range. | ||
| 305 | template<typename T> | ||
| 306 | inline typename std::enable_if<VecTraits<T>::IsVec, bool>::type | ||
| 307 | operator()(const T& v) const { | ||
| 308 | for (int i=0; i<VecTraits<T>::Size; ++i) if ((*this)(v[i])) return true; | ||
| 309 | return false; | ||
| 310 | } | ||
| 311 | |||
| 312 | /// @brief Return true if the voxel at the iterator location is out of range. | ||
| 313 | bool operator()(const TreeIterT &iter) const { return (*this)(*iter); } | ||
| 314 | |||
| 315 | /// @brief Return true if the tile at the iterator location is out of range. | ||
| 316 | bool operator()(const VoxelIterT &iter) const { return (*this)(*iter); } | ||
| 317 | |||
| 318 | /// @brief Return a string describing a failed check. | ||
| 319 | 14 | std::string str() const | |
| 320 | { | ||
| 321 | 28 | std::ostringstream ss; | |
| 322 | ss << "outside the value range " << (MinInclusive ? "[" : "]") | ||
| 323 |
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28 | << minVal << "," << maxVal << (MaxInclusive ? "]" : "["); |
| 324 | 14 | return ss.str(); | |
| 325 | } | ||
| 326 | |||
| 327 | const ElementType minVal, maxVal; | ||
| 328 | };// CheckRange | ||
| 329 | |||
| 330 | //////////////////////////////////////////////////////////////////////////////// | ||
| 331 | |||
| 332 | /// @brief Checks a value against a minimum | ||
| 333 | template <typename GridT, | ||
| 334 | typename TreeIterT = typename GridT::ValueOnCIter> | ||
| 335 | struct CheckMin | ||
| 336 | { | ||
| 337 | using ElementType = typename VecTraits<typename GridT::ValueType>::ElementType; | ||
| 338 | using TileIterT = TreeIterT; | ||
| 339 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 340 | typename TreeIterT::ValueIterT> ::template NodeConverter< | ||
| 341 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 342 | |||
| 343 | // @brief Constructor taking a minimum to be tested against. | ||
| 344 |
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1 | CheckMin(const ElementType& _min) : minVal(_min) {} |
| 345 | |||
| 346 | /// Return true if the value is smaller than min. | ||
| 347 |
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1 | inline bool operator()(const ElementType& v) const { return v<minVal; } |
| 348 | |||
| 349 | /// Return true if any of the vector components are smaller than min. | ||
| 350 | template<typename T> | ||
| 351 | inline typename std::enable_if<VecTraits<T>::IsVec, bool>::type | ||
| 352 | operator()(const T& v) const { | ||
| 353 | for (int i=0; i<VecTraits<T>::Size; ++i) if ((*this)(v[i])) return true; | ||
| 354 | return false; | ||
| 355 | } | ||
| 356 | |||
| 357 | /// @brief Return true if the voxel at the iterator location is smaller than min. | ||
| 358 | bool operator()(const TreeIterT &iter) const { return (*this)(*iter); } | ||
| 359 | |||
| 360 | /// @brief Return true if the tile at the iterator location is smaller than min. | ||
| 361 | bool operator()(const VoxelIterT &iter) const { return (*this)(*iter); } | ||
| 362 | |||
| 363 | /// @brief Return a string describing a failed check. | ||
| 364 | ✗ | std::string str() const | |
| 365 | { | ||
| 366 | ✗ | std::ostringstream ss; | |
| 367 | ✗ | ss << "smaller than "<<minVal; | |
| 368 | ✗ | return ss.str(); | |
| 369 | } | ||
| 370 | |||
| 371 | const ElementType minVal; | ||
| 372 | };// CheckMin | ||
| 373 | |||
| 374 | //////////////////////////////////////////////////////////////////////////////// | ||
| 375 | |||
| 376 | /// @brief Checks a value against a maximum | ||
| 377 | template <typename GridT, | ||
| 378 | typename TreeIterT = typename GridT::ValueOnCIter> | ||
| 379 | struct CheckMax | ||
| 380 | { | ||
| 381 | using ElementType = typename VecTraits<typename GridT::ValueType>::ElementType; | ||
| 382 | using TileIterT = TreeIterT; | ||
| 383 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 384 | typename TreeIterT::ValueIterT> ::template NodeConverter< | ||
| 385 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 386 | |||
| 387 | /// @brief Constructor taking a maximum to be tested against. | ||
| 388 |
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1 | CheckMax(const ElementType& _max) : maxVal(_max) {} |
| 389 | |||
| 390 | /// Return true if the value is larger than max. | ||
| 391 |
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1 | inline bool operator()(const ElementType& v) const { return v>maxVal; } |
| 392 | |||
| 393 | /// Return true if any of the vector components are larger than max. | ||
| 394 | template<typename T> | ||
| 395 | inline typename std::enable_if<VecTraits<T>::IsVec, bool>::type | ||
| 396 | operator()(const T& v) const { | ||
| 397 | for (int i=0; i<VecTraits<T>::Size; ++i) if ((*this)(v[i])) return true; | ||
| 398 | return false; | ||
| 399 | } | ||
| 400 | |||
| 401 | /// @brief Return true if the tile at the iterator location is larger than max. | ||
| 402 | bool operator()(const TreeIterT &iter) const { return (*this)(*iter); } | ||
| 403 | |||
| 404 | /// @brief Return true if the voxel at the iterator location is larger than max. | ||
| 405 | bool operator()(const VoxelIterT &iter) const { return (*this)(*iter); } | ||
| 406 | |||
| 407 | /// @brief Return a string describing a failed check. | ||
| 408 | ✗ | std::string str() const | |
| 409 | { | ||
| 410 | ✗ | std::ostringstream ss; | |
| 411 | ✗ | ss << "larger than "<<maxVal; | |
| 412 | ✗ | return ss.str(); | |
| 413 | } | ||
| 414 | |||
| 415 | const ElementType maxVal; | ||
| 416 | };// CheckMax | ||
| 417 | |||
| 418 | //////////////////////////////////////////////////////////////////////////////// | ||
| 419 | |||
| 420 | /// @brief Checks the norm of the gradient against a range, i.e., | ||
| 421 | /// |∇Φ| ∈ [min, max] | ||
| 422 | /// | ||
| 423 | /// @note Internally the test is performed as | ||
| 424 | /// |∇Φ|² ∈ [min², max²] for optimization reasons. | ||
| 425 | template<typename GridT, | ||
| 426 | typename TreeIterT = typename GridT::ValueOnCIter, | ||
| 427 | math::BiasedGradientScheme GradScheme = math::FIRST_BIAS>//math::WENO5_BIAS> | ||
| 428 |
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7 | struct CheckNormGrad |
| 429 | { | ||
| 430 | using ValueType = typename GridT::ValueType; | ||
| 431 | static_assert(std::is_floating_point<ValueType>::value, | ||
| 432 | "openvdb::tools::CheckNormGrad requires a scalar, floating-point grid"); | ||
| 433 | using TileIterT = TreeIterT; | ||
| 434 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 435 | typename TreeIterT::ValueIterT> ::template NodeConverter< | ||
| 436 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 437 | using AccT = typename GridT::ConstAccessor; | ||
| 438 | |||
| 439 | /// @brief Constructor taking a grid and a range to be tested against. | ||
| 440 | 10 | CheckNormGrad(const GridT& grid, const ValueType& _min, const ValueType& _max) | |
| 441 | : acc(grid.getConstAccessor()) | ||
| 442 |
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10 | , invdx2(ValueType(1.0/math::Pow2(grid.voxelSize()[0]))) |
| 443 | 10 | , minVal2(_min*_min) | |
| 444 |
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10 | , maxVal2(_max*_max) |
| 445 | { | ||
| 446 |
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10 | if ( !grid.hasUniformVoxels() ) { |
| 447 | ✗ | OPENVDB_THROW(ValueError, "CheckNormGrad: The transform must have uniform scale"); | |
| 448 | } | ||
| 449 |
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10 | if (_min > _max) { |
| 450 | ✗ | OPENVDB_THROW(ValueError, "CheckNormGrad: Invalid range (min > max)"); | |
| 451 | } | ||
| 452 | 10 | } | |
| 453 | |||
| 454 |
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53 | CheckNormGrad(const CheckNormGrad& other) |
| 455 | : acc(other.acc.tree()) | ||
| 456 | 53 | , invdx2(other.invdx2) | |
| 457 | 53 | , minVal2(other.minVal2) | |
| 458 | 53 | , maxVal2(other.maxVal2) | |
| 459 | { | ||
| 460 | 53 | } | |
| 461 | |||
| 462 | /// Return true if the value is smaller than min or larger than max. | ||
| 463 |
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4583183 | inline bool operator()(const ValueType& v) const { return v<minVal2 || v>maxVal2; } |
| 464 | |||
| 465 | /// @brief Return true if zero is outside the range. | ||
| 466 | /// @note We assume that the norm of the gradient of a tile is always zero. | ||
| 467 | inline bool operator()(const TreeIterT&) const { return (*this)(ValueType(0)); } | ||
| 468 | |||
| 469 | /// @brief Return true if the norm of the gradient at a voxel | ||
| 470 | /// location of the iterator is out of range. | ||
| 471 | 5536921 | inline bool operator()(const VoxelIterT &iter) const | |
| 472 | { | ||
| 473 | 5536921 | const Coord ijk = iter.getCoord(); | |
| 474 |
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5536921 | return (*this)(invdx2 * math::ISGradientNormSqrd<GradScheme>::result(acc, ijk)); |
| 475 | } | ||
| 476 | |||
| 477 | /// @brief Return a string describing a failed check. | ||
| 478 | 3 | std::string str() const | |
| 479 | { | ||
| 480 | 6 | std::ostringstream ss; | |
| 481 |
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6 | ss << "outside the range of NormGrad ["<<math::Sqrt(minVal2)<<","<<math::Sqrt(maxVal2)<<"]"; |
| 482 | 3 | return ss.str(); | |
| 483 | } | ||
| 484 | |||
| 485 | AccT acc; | ||
| 486 | const ValueType invdx2, minVal2, maxVal2; | ||
| 487 | };// CheckNormGrad | ||
| 488 | |||
| 489 | //////////////////////////////////////////////////////////////////////////////// | ||
| 490 | |||
| 491 | /// @brief Checks the norm of the gradient at zero-crossing voxels against a range | ||
| 492 | /// @details CheckEikonal differs from CheckNormGrad in that it only | ||
| 493 | /// checks the norm of the gradient at voxel locations where the | ||
| 494 | /// FD-stencil crosses the zero isosurface! | ||
| 495 | template<typename GridT, | ||
| 496 | typename TreeIterT = typename GridT::ValueOnCIter, | ||
| 497 | typename StencilT = math::WenoStencil<GridT> >//math::GradStencil<GridT> | ||
| 498 | struct CheckEikonal | ||
| 499 | { | ||
| 500 | using ValueType = typename GridT::ValueType; | ||
| 501 | static_assert(std::is_floating_point<ValueType>::value, | ||
| 502 | "openvdb::tools::CheckEikonal requires a scalar, floating-point grid"); | ||
| 503 | using TileIterT = TreeIterT; | ||
| 504 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 505 | typename TreeIterT::ValueIterT> ::template NodeConverter< | ||
| 506 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 507 | |||
| 508 | /// @brief Constructor taking a grid and a range to be tested against. | ||
| 509 | 2 | CheckEikonal(const GridT& grid, const ValueType& _min, const ValueType& _max) | |
| 510 |
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2 | : stencil(grid), minVal(_min), maxVal(_max) |
| 511 | { | ||
| 512 |
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2 | if ( !grid.hasUniformVoxels() ) { |
| 513 | ✗ | OPENVDB_THROW(ValueError, "CheckEikonal: The transform must have uniform scale"); | |
| 514 | } | ||
| 515 |
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2 | if (minVal > maxVal) { |
| 516 | ✗ | OPENVDB_THROW(ValueError, "CheckEikonal: Invalid range (min > max)"); | |
| 517 | } | ||
| 518 | 2 | } | |
| 519 | |||
| 520 | 4 | CheckEikonal(const CheckEikonal& other) | |
| 521 | 2 | : stencil(other.stencil.grid()), minVal(other.minVal), maxVal(other.maxVal) | |
| 522 | { | ||
| 523 | } | ||
| 524 | |||
| 525 | /// Return true if the value is smaller than min or larger than max. | ||
| 526 |
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76612 | inline bool operator()(const ValueType& v) const { return v<minVal || v>maxVal; } |
| 527 | |||
| 528 | /// @brief Return true if zero is outside the range. | ||
| 529 | /// @note We assume that the norm of the gradient of a tile is always zero. | ||
| 530 | inline bool operator()(const TreeIterT&) const { return (*this)(ValueType(0)); } | ||
| 531 | |||
| 532 | /// @brief Return true if the norm of the gradient at a | ||
| 533 | /// zero-crossing voxel location of the iterator is out of range. | ||
| 534 | 232732 | inline bool operator()(const VoxelIterT &iter) const | |
| 535 | { | ||
| 536 | 232732 | stencil.moveTo(iter); | |
| 537 |
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232732 | if (!stencil.zeroCrossing()) return false; |
| 538 |
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153224 | return (*this)(stencil.normSqGrad()); |
| 539 | } | ||
| 540 | |||
| 541 | /// @brief Return a string describing a failed check. | ||
| 542 | ✗ | std::string str() const | |
| 543 | { | ||
| 544 | ✗ | std::ostringstream ss; | |
| 545 | ✗ | ss << "outside the range of NormGrad ["<<minVal<<","<<maxVal<<"]"; | |
| 546 | ✗ | return ss.str(); | |
| 547 | } | ||
| 548 | |||
| 549 | mutable StencilT stencil; | ||
| 550 | const ValueType minVal, maxVal; | ||
| 551 | };// CheckEikonal | ||
| 552 | |||
| 553 | //////////////////////////////////////////////////////////////////////////////// | ||
| 554 | |||
| 555 | /// @brief Checks the divergence against a range | ||
| 556 | template<typename GridT, | ||
| 557 | typename TreeIterT = typename GridT::ValueOnCIter, | ||
| 558 | math::DScheme DiffScheme = math::CD_2ND> | ||
| 559 | struct CheckDivergence | ||
| 560 | { | ||
| 561 | using ValueType = typename GridT::ValueType; | ||
| 562 | using ElementType = typename VecTraits<ValueType>::ElementType; | ||
| 563 | static_assert(std::is_floating_point<ElementType>::value, | ||
| 564 | "openvdb::tools::CheckDivergence requires a floating-point vector grid"); | ||
| 565 | using TileIterT = TreeIterT; | ||
| 566 | using VoxelIterT = typename tree::IterTraits<typename TreeIterT::NodeT, | ||
| 567 | typename TreeIterT::ValueIterT>::template NodeConverter< | ||
| 568 | typename GridT::TreeType::LeafNodeType>::Type; | ||
| 569 | using AccT = typename GridT::ConstAccessor; | ||
| 570 | |||
| 571 | /// @brief Constructor taking a grid and a range to be tested against. | ||
| 572 | CheckDivergence(const GridT& grid, | ||
| 573 | const ValueType& _min, | ||
| 574 | const ValueType& _max) | ||
| 575 | : acc(grid.getConstAccessor()) | ||
| 576 | , invdx(ValueType(1.0/grid.voxelSize()[0])) | ||
| 577 | , minVal(_min) | ||
| 578 | , maxVal(_max) | ||
| 579 | { | ||
| 580 | if ( !grid.hasUniformVoxels() ) { | ||
| 581 | OPENVDB_THROW(ValueError, "CheckDivergence: The transform must have uniform scale"); | ||
| 582 | } | ||
| 583 | if (minVal > maxVal) { | ||
| 584 | OPENVDB_THROW(ValueError, "CheckDivergence: Invalid range (min > max)"); | ||
| 585 | } | ||
| 586 | } | ||
| 587 | /// Return true if the value is smaller than min or larger than max. | ||
| 588 | inline bool operator()(const ElementType& v) const { return v<minVal || v>maxVal; } | ||
| 589 | |||
| 590 | /// @brief Return true if zero is outside the range. | ||
| 591 | /// @note We assume that the divergence of a tile is always zero. | ||
| 592 | inline bool operator()(const TreeIterT&) const { return (*this)(ElementType(0)); } | ||
| 593 | |||
| 594 | /// @brief Return true if the divergence at a voxel location of | ||
| 595 | /// the iterator is out of range. | ||
| 596 | inline bool operator()(const VoxelIterT &iter) const | ||
| 597 | { | ||
| 598 | const Coord ijk = iter.getCoord(); | ||
| 599 | return (*this)(invdx * math::ISDivergence<DiffScheme>::result(acc, ijk)); | ||
| 600 | } | ||
| 601 | |||
| 602 | /// @brief Return a string describing a failed check. | ||
| 603 | std::string str() const | ||
| 604 | { | ||
| 605 | std::ostringstream ss; | ||
| 606 | ss << "outside the range of divergence ["<<minVal<<","<<maxVal<<"]"; | ||
| 607 | return ss.str(); | ||
| 608 | } | ||
| 609 | |||
| 610 | AccT acc; | ||
| 611 | const ValueType invdx, minVal, maxVal; | ||
| 612 | };// CheckDivergence | ||
| 613 | |||
| 614 | //////////////////////////////////////////////////////////////////////////////// | ||
| 615 | |||
| 616 | /// @brief Performs multithreaded diagnostics of a grid | ||
| 617 | /// @note More documentation will be added soon! | ||
| 618 | template <typename GridT> | ||
| 619 |
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9 | class Diagnose |
| 620 | { | ||
| 621 | public: | ||
| 622 | using MaskType = typename GridT::template ValueConverter<bool>::Type; | ||
| 623 | |||
| 624 | 64 | Diagnose(const GridT& grid) : mGrid(&grid), mMask(new MaskType()), mCount(0) | |
| 625 | { | ||
| 626 |
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64 | mMask->setTransform(grid.transformPtr()->copy()); |
| 627 | 32 | } | |
| 628 | |||
| 629 | template <typename CheckT> | ||
| 630 | 82 | std::string check(const CheckT& check, | |
| 631 | bool updateMask = false, | ||
| 632 | bool checkVoxels = true, | ||
| 633 | bool checkTiles = true, | ||
| 634 | bool checkBackground = true) | ||
| 635 | { | ||
| 636 |
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82 | typename MaskType::TreeType* mask = updateMask ? &(mMask->tree()) : nullptr; |
| 637 | 82 | CheckValues<CheckT> cc(mask, mGrid, check); | |
| 638 | 82 | std::ostringstream ss; | |
| 639 |
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130 | if (checkBackground) ss << cc.checkBackground(); |
| 640 |
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136 | if (checkTiles) ss << cc.checkTiles(); |
| 641 |
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164 | if (checkVoxels) ss << cc.checkVoxels(); |
| 642 |
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82 | mCount += cc.mCount; |
| 643 | 82 | return ss.str(); | |
| 644 | } | ||
| 645 | |||
| 646 | //@{ | ||
| 647 | /// @brief Return a boolean mask of all the values | ||
| 648 | /// (i.e. tiles and/or voxels) that have failed one or | ||
| 649 | /// more checks. | ||
| 650 | typename MaskType::ConstPtr mask() const { return mMask; } | ||
| 651 | typename MaskType::Ptr mask() { return mMask; } | ||
| 652 | //@} | ||
| 653 | |||
| 654 | /// @brief Return the number of values (i.e. background, tiles or | ||
| 655 | /// voxels) that have failed one or more checks. | ||
| 656 |
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14 | Index64 valueCount() const { return mMask->activeVoxelCount(); } |
| 657 | |||
| 658 | /// @brief Return total number of failed checks | ||
| 659 | /// @note If only one check was performed and the mask was updated | ||
| 660 | /// failureCount equals valueCount. | ||
| 661 |
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26 | Index64 failureCount() const { return mCount; } |
| 662 | |||
| 663 | /// @brief Return a const reference to the grid | ||
| 664 | ✗ | const GridT& grid() const { return *mGrid; } | |
| 665 | |||
| 666 | /// @brief Clear the mask and error counter | ||
| 667 | void clear() { mMask = new MaskType(); mCount = 0; } | ||
| 668 | |||
| 669 | private: | ||
| 670 | // disallow copy construction and copy by assignment! | ||
| 671 | Diagnose(const Diagnose&);// not implemented | ||
| 672 | Diagnose& operator=(const Diagnose&);// not implemented | ||
| 673 | |||
| 674 | const GridT* mGrid; | ||
| 675 | typename MaskType::Ptr mMask; | ||
| 676 | Index64 mCount; | ||
| 677 | |||
| 678 | /// @brief Private class that performs the multithreaded checks | ||
| 679 | template <typename CheckT> | ||
| 680 | struct CheckValues | ||
| 681 | { | ||
| 682 | using MaskT = typename MaskType::TreeType; | ||
| 683 | using LeafT = typename GridT::TreeType::LeafNodeType; | ||
| 684 | using LeafManagerT = typename tree::LeafManager<const typename GridT::TreeType>; | ||
| 685 | const bool mOwnsMask; | ||
| 686 | MaskT* mMask; | ||
| 687 | const GridT* mGrid; | ||
| 688 | const CheckT mCheck; | ||
| 689 | Index64 mCount; | ||
| 690 | |||
| 691 | 41 | CheckValues(MaskT* mask, const GridT* grid, const CheckT& check) | |
| 692 | : mOwnsMask(false) | ||
| 693 | , mMask(mask) | ||
| 694 | , mGrid(grid) | ||
| 695 | , mCheck(check) | ||
| 696 |
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41 | , mCount(0) |
| 697 | { | ||
| 698 | } | ||
| 699 | 248 | CheckValues(CheckValues& other, tbb::split) | |
| 700 | : mOwnsMask(true) | ||
| 701 | 12 | , mMask(other.mMask ? new MaskT() : nullptr) | |
| 702 | 248 | , mGrid(other.mGrid) | |
| 703 | 86 | , mCheck(other.mCheck) | |
| 704 |
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248 | , mCount(0) |
| 705 | { | ||
| 706 | } | ||
| 707 |
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222 | ~CheckValues() { if (mOwnsMask) delete mMask; } |
| 708 | |||
| 709 | 48 | std::string checkBackground() | |
| 710 | { | ||
| 711 | 96 | std::ostringstream ss; | |
| 712 |
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48 | if (mCheck(mGrid->background())) { |
| 713 |
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2 | ++mCount; |
| 714 |
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4 | ss << "Background is " + mCheck.str() << std::endl; |
| 715 | } | ||
| 716 | 48 | return ss.str(); | |
| 717 | } | ||
| 718 | |||
| 719 | 54 | std::string checkTiles() | |
| 720 | { | ||
| 721 | 108 | std::ostringstream ss; | |
| 722 | 54 | const Index64 n = mCount; | |
| 723 |
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54 | typename CheckT::TileIterT i(mGrid->tree()); |
| 724 |
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1522434 | for (i.setMaxDepth(GridT::TreeType::RootNodeType::LEVEL - 1); i; ++i) { |
| 725 |
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1294260 | if (mCheck(i)) { |
| 726 | 2 | ++mCount; | |
| 727 |
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2 | if (mMask) mMask->fill(i.getBoundingBox(), true, true); |
| 728 | } | ||
| 729 | } | ||
| 730 |
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54 | if (const Index64 m = mCount - n) { |
| 731 |
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4 | ss << m << " tile" << (m==1 ? " is " : "s are ") + mCheck.str() << std::endl; |
| 732 | } | ||
| 733 | 54 | return ss.str(); | |
| 734 | } | ||
| 735 | |||
| 736 | 82 | std::string checkVoxels() | |
| 737 | { | ||
| 738 | 164 | std::ostringstream ss; | |
| 739 |
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164 | LeafManagerT leafs(mGrid->tree()); |
| 740 |
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82 | const Index64 n = mCount; |
| 741 |
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82 | tbb::parallel_reduce(leafs.leafRange(), *this); |
| 742 |
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82 | if (const Index64 m = mCount - n) { |
| 743 |
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52 | ss << m << " voxel" << (m==1 ? " is " : "s are ") + mCheck.str() << std::endl; |
| 744 | } | ||
| 745 | 82 | return ss.str(); | |
| 746 | } | ||
| 747 | |||
| 748 | 10342 | void operator()(const typename LeafManagerT::LeafRange& r) | |
| 749 | { | ||
| 750 | using VoxelIterT = typename CheckT::VoxelIterT; | ||
| 751 |
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10342 | if (mMask) { |
| 752 |
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1616 | for (typename LeafManagerT::LeafRange::Iterator i=r.begin(); i; ++i) { |
| 753 | typename MaskT::LeafNodeType* maskLeaf = nullptr; | ||
| 754 |
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188744 | for (VoxelIterT j = tree::IterTraits<LeafT, VoxelIterT>::begin(*i); j; ++j) { |
| 755 | ✗ | if (mCheck(j)) { | |
| 756 | 88300 | ++mCount; | |
| 757 |
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89378 | if (maskLeaf == nullptr) maskLeaf = mMask->touchLeaf(j.getCoord()); |
| 758 | 88300 | maskLeaf->setValueOn(j.pos(), true); | |
| 759 | } | ||
| 760 | } | ||
| 761 | } | ||
| 762 | } else { | ||
| 763 |
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75754 | for (typename LeafManagerT::LeafRange::Iterator i=r.begin(); i; ++i) { |
| 764 |
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20796414 | for (VoxelIterT j = tree::IterTraits<LeafT, VoxelIterT>::begin(*i); j; ++j) { |
| 765 |
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17893074 | if (mCheck(j)) ++mCount; |
| 766 | } | ||
| 767 | } | ||
| 768 | } | ||
| 769 | 10342 | } | |
| 770 | void join(const CheckValues& other) | ||
| 771 | { | ||
| 772 |
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124 | if (mMask) mMask->merge(*(other.mMask), openvdb::MERGE_ACTIVE_STATES_AND_NODES); |
| 773 | 124 | mCount += other.mCount; | |
| 774 | 124 | } | |
| 775 | };//End of private class CheckValues | ||
| 776 | |||
| 777 | };// End of public class Diagnose | ||
| 778 | |||
| 779 | |||
| 780 | //////////////////////////////////////////////////////////////////////////////// | ||
| 781 | |||
| 782 | /// @brief Class that performs various types of checks on narrow-band level sets. | ||
| 783 | /// | ||
| 784 | /// @note The most common usage is to simply call CheckLevelSet::check() | ||
| 785 | template<class GridType> | ||
| 786 | class CheckLevelSet | ||
| 787 | { | ||
| 788 | public: | ||
| 789 | using ValueType = typename GridType::ValueType; | ||
| 790 | using MaskType = typename GridType::template ValueConverter<bool>::Type; | ||
| 791 | |||
| 792 | 3 | CheckLevelSet(const GridType& grid) : mDiagnose(grid) {} | |
| 793 | |||
| 794 | //@{ | ||
| 795 | /// @brief Return a boolean mask of all the values | ||
| 796 | /// (i.e. tiles and/or voxels) that have failed one or | ||
| 797 | /// more checks. | ||
| 798 | typename MaskType::ConstPtr mask() const { return mDiagnose.mask(); } | ||
| 799 | typename MaskType::Ptr mask() { return mDiagnose.mask(); } | ||
| 800 | //@} | ||
| 801 | |||
| 802 | /// @brief Return the number of values (i.e. background, tiles or | ||
| 803 | /// voxels) that have failed one or more checks. | ||
| 804 | Index64 valueCount() const { return mDiagnose.valueCount(); } | ||
| 805 | |||
| 806 | /// @brief Return total number of failed checks | ||
| 807 | /// @note If only one check was performed and the mask was updated | ||
| 808 | /// failureCount equals valueCount. | ||
| 809 | Index64 failureCount() const { return mDiagnose.failureCount(); } | ||
| 810 | |||
| 811 | /// @brief Return a const reference to the grid | ||
| 812 | const GridType& grid() const { return mDiagnose.grid(); } | ||
| 813 | |||
| 814 | /// @brief Clear the mask and error counter | ||
| 815 | void clear() { mDiagnose.clear(); } | ||
| 816 | |||
| 817 | /// @brief Return a nonempty message if the grid's value type is a floating point. | ||
| 818 | /// | ||
| 819 | /// @note No run-time overhead | ||
| 820 | static std::string checkValueType() | ||
| 821 | { | ||
| 822 | static const bool test = std::is_floating_point<ValueType>::value; | ||
| 823 |
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3 | return test ? "" : "Value type is not floating point\n"; |
| 824 | } | ||
| 825 | |||
| 826 | /// @brief Return message if the grid's class is a level set. | ||
| 827 | /// | ||
| 828 | /// @note Small run-time overhead | ||
| 829 | 6 | std::string checkClassType() const | |
| 830 | { | ||
| 831 | 6 | const bool test = mDiagnose.grid().getGridClass() == GRID_LEVEL_SET; | |
| 832 |
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6 | return test ? "" : "Class type is not \"GRID_LEVEL_SET\"\n"; |
| 833 | } | ||
| 834 | |||
| 835 | /// @brief Return a nonempty message if the grid's transform does not have uniform scaling. | ||
| 836 | /// | ||
| 837 | /// @note Small run-time overhead | ||
| 838 |
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6 | std::string checkTransform() const |
| 839 | { | ||
| 840 |
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6 | return mDiagnose.grid().hasUniformVoxels() ? "" : "Does not have uniform voxels\n"; |
| 841 | } | ||
| 842 | |||
| 843 | /// @brief Return a nonempty message if the background value is larger than or | ||
| 844 | /// equal to the halfWidth*voxelSize. | ||
| 845 | /// | ||
| 846 | /// @note Small run-time overhead | ||
| 847 | 6 | std::string checkBackground(Real halfWidth = LEVEL_SET_HALF_WIDTH) const | |
| 848 | { | ||
| 849 | 6 | const Real w = mDiagnose.grid().background() / mDiagnose.grid().voxelSize()[0]; | |
| 850 |
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6 | if (w < halfWidth) { |
| 851 | ✗ | std::ostringstream ss; | |
| 852 | ✗ | ss << "The background value ("<< mDiagnose.grid().background()<<") is less than " | |
| 853 | ✗ | << halfWidth << " voxel units\n"; | |
| 854 | return ss.str(); | ||
| 855 | } | ||
| 856 | 6 | return ""; | |
| 857 | } | ||
| 858 | |||
| 859 | /// @brief Return a nonempty message if the grid has no active tile values. | ||
| 860 | /// | ||
| 861 | /// @note Medium run-time overhead | ||
| 862 | 6 | std::string checkTiles() const | |
| 863 | { | ||
| 864 | const bool test = mDiagnose.grid().tree().hasActiveTiles(); | ||
| 865 |
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12 | return test ? "Has active tile values\n" : ""; |
| 866 | } | ||
| 867 | |||
| 868 | /// @brief Return a nonempty message if any of the values are not finite. i.e. NaN or inf. | ||
| 869 | /// | ||
| 870 | /// @note Medium run-time overhead | ||
| 871 | std::string checkFinite(bool updateMask = false) | ||
| 872 | { | ||
| 873 | CheckFinite<GridType,typename GridType::ValueAllCIter> c; | ||
| 874 | 3 | return mDiagnose.check(c, updateMask, /*voxel*/true, /*tiles*/true, /*background*/true); | |
| 875 | } | ||
| 876 | |||
| 877 | /// @brief Return a nonempty message if the active voxel values are out-of-range. | ||
| 878 | /// | ||
| 879 | /// @note Medium run-time overhead | ||
| 880 | 4 | std::string checkRange(bool updateMask = false) | |
| 881 | { | ||
| 882 | const ValueType& background = mDiagnose.grid().background(); | ||
| 883 | 4 | CheckRange<GridType> c(-background, background); | |
| 884 | 4 | return mDiagnose.check(c, updateMask, /*voxel*/true, /*tiles*/false, /*background*/false); | |
| 885 | } | ||
| 886 | |||
| 887 | /// @brief Return a nonempty message if the the inactive values do not have a | ||
| 888 | /// magnitude equal to the background value. | ||
| 889 | /// | ||
| 890 | /// @note Medium run-time overhead | ||
| 891 | 2 | std::string checkInactiveValues(bool updateMask = false) | |
| 892 | { | ||
| 893 | const ValueType& background = mDiagnose.grid().background(); | ||
| 894 | CheckMagnitude<GridType, typename GridType::ValueOffCIter> c(background); | ||
| 895 | 2 | return mDiagnose.check(c, updateMask, /*voxel*/true, /*tiles*/true, /*background*/false); | |
| 896 | } | ||
| 897 | |||
| 898 | /// @brief Return a nonempty message if the norm of the gradient of the | ||
| 899 | /// active voxels is out of the range minV to maxV. | ||
| 900 | /// | ||
| 901 | /// @note Significant run-time overhead | ||
| 902 | 2 | std::string checkEikonal(bool updateMask = false, ValueType minV = 0.5, ValueType maxV = 1.5) | |
| 903 | { | ||
| 904 | 2 | CheckEikonal<GridType> c(mDiagnose.grid(), minV, maxV); | |
| 905 |
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4 | return mDiagnose.check(c, updateMask, /*voxel*/true, /*tiles*/false, /*background*/false); |
| 906 | } | ||
| 907 | |||
| 908 | /// @brief Return a nonempty message if an error or issue is detected. Only | ||
| 909 | /// runs tests with a number lower than or equal to n, where: | ||
| 910 | /// | ||
| 911 | /// Fast checks | ||
| 912 | /// 1: value type is floating point | ||
| 913 | /// 2: has level set class type | ||
| 914 | /// 3: has uniform scale | ||
| 915 | /// 4: background value is positive and n*dx | ||
| 916 | /// | ||
| 917 | /// Slower checks | ||
| 918 | /// 5: no active tiles | ||
| 919 | /// 6: all the values are finite, i.e not NaN or infinite | ||
| 920 | /// 7: active values in range between +-background | ||
| 921 | /// 8: abs of inactive values = background, i.e. assuming a symmetric narrow band! | ||
| 922 | /// | ||
| 923 | /// Relatively slow check (however multi-threaded) | ||
| 924 | /// 9: norm of gradient at zero-crossings is one, i.e. satisfied the Eikonal equation. | ||
| 925 | 6 | std::string check(size_t n=9, bool updateMask = false) | |
| 926 | { | ||
| 927 | std::string str = this->checkValueType(); | ||
| 928 |
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12 | if (str.empty() && n>1) str = this->checkClassType(); |
| 929 |
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12 | if (str.empty() && n>2) str = this->checkTransform(); |
| 930 |
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12 | if (str.empty() && n>3) str = this->checkBackground(); |
| 931 |
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12 | if (str.empty() && n>4) str = this->checkTiles(); |
| 932 |
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12 | if (str.empty() && n>5) str = this->checkFinite(updateMask); |
| 933 |
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10 | if (str.empty() && n>6) str = this->checkRange(updateMask); |
| 934 |
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8 | if (str.empty() && n>7) str = this->checkInactiveValues(updateMask); |
| 935 |
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8 | if (str.empty() && n>8) str = this->checkEikonal(updateMask); |
| 936 | 6 | return str; | |
| 937 | } | ||
| 938 | |||
| 939 | private: | ||
| 940 | // disallow copy construction and copy by assignment! | ||
| 941 | CheckLevelSet(const CheckLevelSet&);// not implemented | ||
| 942 | CheckLevelSet& operator=(const CheckLevelSet&);// not implemented | ||
| 943 | |||
| 944 | // Member data | ||
| 945 | Diagnose<GridType> mDiagnose; | ||
| 946 | };// CheckLevelSet | ||
| 947 | |||
| 948 | template<class GridType> | ||
| 949 | std::string | ||
| 950 | 6 | checkLevelSet(const GridType& grid, size_t n) | |
| 951 | { | ||
| 952 | CheckLevelSet<GridType> c(grid); | ||
| 953 |
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12 | return c.check(n, false); |
| 954 | } | ||
| 955 | |||
| 956 | //////////////////////////////////////////////////////////////////////////////// | ||
| 957 | |||
| 958 | /// @brief Class that performs various types of checks on fog volumes. | ||
| 959 | /// | ||
| 960 | /// @note The most common usage is to simply call CheckFogVolume::check() | ||
| 961 | template<class GridType> | ||
| 962 | class CheckFogVolume | ||
| 963 | { | ||
| 964 | public: | ||
| 965 | using ValueType = typename GridType::ValueType; | ||
| 966 | using MaskType = typename GridType::template ValueConverter<bool>::Type; | ||
| 967 | |||
| 968 | 3 | CheckFogVolume(const GridType& grid) : mDiagnose(grid) {} | |
| 969 | |||
| 970 | //@{ | ||
| 971 | /// @brief Return a boolean mask of all the values | ||
| 972 | /// (i.e. tiles and/or voxels) that have failed one or | ||
| 973 | /// more checks. | ||
| 974 | typename MaskType::ConstPtr mask() const { return mDiagnose.mask(); } | ||
| 975 | typename MaskType::Ptr mask() { return mDiagnose.mask(); } | ||
| 976 | //@} | ||
| 977 | |||
| 978 | /// @brief Return the number of values (i.e. background, tiles or | ||
| 979 | /// voxels) that have failed one or more checks. | ||
| 980 | Index64 valueCount() const { return mDiagnose.valueCount(); } | ||
| 981 | |||
| 982 | /// @brief Return total number of failed checks | ||
| 983 | /// @note If only one check was performed and the mask was updated | ||
| 984 | /// failureCount equals valueCount. | ||
| 985 | Index64 failureCount() const { return mDiagnose.failureCount(); } | ||
| 986 | |||
| 987 | /// @brief Return a const reference to the grid | ||
| 988 | const GridType& grid() const { return mDiagnose.grid(); } | ||
| 989 | |||
| 990 | /// @brief Clear the mask and error counter | ||
| 991 | void clear() { mDiagnose.clear(); } | ||
| 992 | |||
| 993 | /// @brief Return a nonempty message if the grid's value type is a floating point. | ||
| 994 | /// | ||
| 995 | /// @note No run-time overhead | ||
| 996 | static std::string checkValueType() | ||
| 997 | { | ||
| 998 | static const bool test = std::is_floating_point<ValueType>::value; | ||
| 999 |
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3 | return test ? "" : "Value type is not floating point"; |
| 1000 | } | ||
| 1001 | |||
| 1002 | /// @brief Return a nonempty message if the grid's class is a level set. | ||
| 1003 | /// | ||
| 1004 | /// @note Small run-time overhead | ||
| 1005 | 6 | std::string checkClassType() const | |
| 1006 | { | ||
| 1007 | 6 | const bool test = mDiagnose.grid().getGridClass() == GRID_FOG_VOLUME; | |
| 1008 |
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6 | return test ? "" : "Class type is not \"GRID_LEVEL_SET\""; |
| 1009 | } | ||
| 1010 | |||
| 1011 | /// @brief Return a nonempty message if the background value is not zero. | ||
| 1012 | /// | ||
| 1013 | /// @note Small run-time overhead | ||
| 1014 |
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6 | std::string checkBackground() const |
| 1015 | { | ||
| 1016 | if (!math::isApproxZero(mDiagnose.grid().background())) { | ||
| 1017 | ✗ | std::ostringstream ss; | |
| 1018 | ✗ | ss << "The background value ("<< mDiagnose.grid().background()<<") is not zero"; | |
| 1019 | return ss.str(); | ||
| 1020 | } | ||
| 1021 | 6 | return ""; | |
| 1022 | } | ||
| 1023 | |||
| 1024 | /// @brief Return a nonempty message if any of the values are not finite. i.e. NaN or inf. | ||
| 1025 | /// | ||
| 1026 | /// @note Medium run-time overhead | ||
| 1027 | std::string checkFinite(bool updateMask = false) | ||
| 1028 | { | ||
| 1029 | CheckFinite<GridType,typename GridType::ValueAllCIter> c; | ||
| 1030 | 3 | return mDiagnose.check(c, updateMask, /*voxel*/true, /*tiles*/true, /*background*/true); | |
| 1031 | } | ||
| 1032 | |||
| 1033 | /// @brief Return a nonempty message if any of the inactive values are not zero. | ||
| 1034 | /// | ||
| 1035 | /// @note Medium run-time overhead | ||
| 1036 | std::string checkInactiveValues(bool updateMask = false) | ||
| 1037 | { | ||
| 1038 | CheckMagnitude<GridType, typename GridType::ValueOffCIter> c(0); | ||
| 1039 | 3 | return mDiagnose.check(c, updateMask, /*voxel*/true, /*tiles*/true, /*background*/true); | |
| 1040 | } | ||
| 1041 | |||
| 1042 | /// @brief Return a nonempty message if the active voxel values | ||
| 1043 | /// are out-of-range, i.e. not in the range [0,1]. | ||
| 1044 | /// | ||
| 1045 | /// @note Medium run-time overhead | ||
| 1046 | 4 | std::string checkRange(bool updateMask = false) | |
| 1047 | { | ||
| 1048 | 4 | CheckRange<GridType> c(0, 1); | |
| 1049 | 4 | return mDiagnose.check(c, updateMask, /*voxel*/true, /*tiles*/true, /*background*/false); | |
| 1050 | } | ||
| 1051 | |||
| 1052 | /// @brief Return a nonempty message if an error or issue is detected. Only | ||
| 1053 | /// runs tests with a number lower than or equal to n, where: | ||
| 1054 | /// | ||
| 1055 | /// Fast checks | ||
| 1056 | /// 1: value type is floating point | ||
| 1057 | /// 2: has FOG volume class type | ||
| 1058 | /// 3: background value is zero | ||
| 1059 | /// | ||
| 1060 | /// Slower checks | ||
| 1061 | /// 4: all the values are finite, i.e not NaN or infinite | ||
| 1062 | /// 5: inactive values are zero | ||
| 1063 | /// 6: active values are in the range [0,1] | ||
| 1064 | 6 | std::string check(size_t n=6, bool updateMask = false) | |
| 1065 | { | ||
| 1066 | std::string str = this->checkValueType(); | ||
| 1067 |
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12 | if (str.empty() && n>1) str = this->checkClassType(); |
| 1068 |
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12 | if (str.empty() && n>2) str = this->checkBackground(); |
| 1069 |
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12 | if (str.empty() && n>3) str = this->checkFinite(updateMask); |
| 1070 |
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12 | if (str.empty() && n>4) str = this->checkInactiveValues(updateMask); |
| 1071 |
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10 | if (str.empty() && n>5) str = this->checkRange(updateMask); |
| 1072 | 6 | return str; | |
| 1073 | } | ||
| 1074 | |||
| 1075 | private: | ||
| 1076 | // disallow copy construction and copy by assignment! | ||
| 1077 | CheckFogVolume(const CheckFogVolume&);// not implemented | ||
| 1078 | CheckFogVolume& operator=(const CheckFogVolume&);// not implemented | ||
| 1079 | |||
| 1080 | // Member data | ||
| 1081 | Diagnose<GridType> mDiagnose; | ||
| 1082 | };// CheckFogVolume | ||
| 1083 | |||
| 1084 | template<class GridType> | ||
| 1085 | std::string | ||
| 1086 | 6 | checkFogVolume(const GridType& grid, size_t n) | |
| 1087 | { | ||
| 1088 | CheckFogVolume<GridType> c(grid); | ||
| 1089 |
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12 | return c.check(n, false); |
| 1090 | } | ||
| 1091 | |||
| 1092 | |||
| 1093 | //////////////////////////////////////////////////////////////////////////////// | ||
| 1094 | |||
| 1095 | // Internal utility objects and implementation details | ||
| 1096 | |||
| 1097 | /// @cond OPENVDB_DOCS_INTERNAL | ||
| 1098 | |||
| 1099 | namespace diagnostics_internal { | ||
| 1100 | |||
| 1101 | |||
| 1102 | template<typename TreeType> | ||
| 1103 | 2 | class InactiveVoxelValues | |
| 1104 | { | ||
| 1105 | public: | ||
| 1106 | using LeafArray = tree::LeafManager<TreeType>; | ||
| 1107 | using ValueType = typename TreeType::ValueType; | ||
| 1108 | using SetType = std::set<ValueType>; | ||
| 1109 | |||
| 1110 | InactiveVoxelValues(LeafArray&, size_t numValues); | ||
| 1111 | |||
| 1112 | void runParallel(); | ||
| 1113 | void runSerial(); | ||
| 1114 | |||
| 1115 | void getInactiveValues(SetType&) const; | ||
| 1116 | |||
| 1117 | inline InactiveVoxelValues(const InactiveVoxelValues<TreeType>&, tbb::split); | ||
| 1118 | inline void operator()(const tbb::blocked_range<size_t>&); | ||
| 1119 | inline void join(const InactiveVoxelValues<TreeType>&); | ||
| 1120 | |||
| 1121 | private: | ||
| 1122 | LeafArray& mLeafArray; | ||
| 1123 | SetType mInactiveValues; | ||
| 1124 | size_t mNumValues; | ||
| 1125 | };// InactiveVoxelValues | ||
| 1126 | |||
| 1127 | template<typename TreeType> | ||
| 1128 | 6 | InactiveVoxelValues<TreeType>::InactiveVoxelValues(LeafArray& leafs, size_t numValues) | |
| 1129 | : mLeafArray(leafs) | ||
| 1130 | , mInactiveValues() | ||
| 1131 | 6 | , mNumValues(numValues) | |
| 1132 | { | ||
| 1133 | } | ||
| 1134 | |||
| 1135 | template <typename TreeType> | ||
| 1136 | inline | ||
| 1137 | 2 | InactiveVoxelValues<TreeType>::InactiveVoxelValues( | |
| 1138 | const InactiveVoxelValues<TreeType>& rhs, tbb::split) | ||
| 1139 | 2 | : mLeafArray(rhs.mLeafArray) | |
| 1140 | , mInactiveValues() | ||
| 1141 | 2 | , mNumValues(rhs.mNumValues) | |
| 1142 | { | ||
| 1143 | } | ||
| 1144 | |||
| 1145 | template<typename TreeType> | ||
| 1146 | void | ||
| 1147 | 6 | InactiveVoxelValues<TreeType>::runParallel() | |
| 1148 | { | ||
| 1149 | 6 | tbb::parallel_reduce(mLeafArray.getRange(), *this); | |
| 1150 | } | ||
| 1151 | |||
| 1152 | |||
| 1153 | template<typename TreeType> | ||
| 1154 | void | ||
| 1155 | InactiveVoxelValues<TreeType>::runSerial() | ||
| 1156 | { | ||
| 1157 | (*this)(mLeafArray.getRange()); | ||
| 1158 | } | ||
| 1159 | |||
| 1160 | |||
| 1161 | template<typename TreeType> | ||
| 1162 | inline void | ||
| 1163 | 100 | InactiveVoxelValues<TreeType>::operator()(const tbb::blocked_range<size_t>& range) | |
| 1164 | { | ||
| 1165 | typename TreeType::LeafNodeType::ValueOffCIter iter; | ||
| 1166 | |||
| 1167 |
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300 | for (size_t n = range.begin(); n < range.end() && !thread::isGroupExecutionCancelled(); ++n) { |
| 1168 |
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38678 | for (iter = mLeafArray.leaf(n).cbeginValueOff(); iter; ++iter) { |
| 1169 | 38378 | mInactiveValues.insert(iter.getValue()); | |
| 1170 | } | ||
| 1171 | |||
| 1172 |
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100 | if (mInactiveValues.size() > mNumValues) { |
| 1173 | ✗ | thread::cancelGroupExecution(); | |
| 1174 | } | ||
| 1175 | } | ||
| 1176 | } | ||
| 1177 | |||
| 1178 | template<typename TreeType> | ||
| 1179 | inline void | ||
| 1180 | 4 | InactiveVoxelValues<TreeType>::join(const InactiveVoxelValues<TreeType>& rhs) | |
| 1181 | { | ||
| 1182 | 4 | mInactiveValues.insert(rhs.mInactiveValues.begin(), rhs.mInactiveValues.end()); | |
| 1183 | } | ||
| 1184 | |||
| 1185 | template<typename TreeType> | ||
| 1186 | inline void | ||
| 1187 | 6 | InactiveVoxelValues<TreeType>::getInactiveValues(SetType& values) const | |
| 1188 | { | ||
| 1189 | 6 | values.insert(mInactiveValues.begin(), mInactiveValues.end()); | |
| 1190 | } | ||
| 1191 | |||
| 1192 | |||
| 1193 | //////////////////////////////////////// | ||
| 1194 | |||
| 1195 | |||
| 1196 | template<typename TreeType> | ||
| 1197 | 18 | class InactiveTileValues | |
| 1198 | { | ||
| 1199 | public: | ||
| 1200 | using IterRange = tree::IteratorRange<typename TreeType::ValueOffCIter>; | ||
| 1201 | using ValueType = typename TreeType::ValueType; | ||
| 1202 | using SetType = std::set<ValueType>; | ||
| 1203 | |||
| 1204 | InactiveTileValues(size_t numValues); | ||
| 1205 | |||
| 1206 | void runParallel(IterRange&); | ||
| 1207 | void runSerial(IterRange&); | ||
| 1208 | |||
| 1209 | void getInactiveValues(SetType&) const; | ||
| 1210 | |||
| 1211 | inline InactiveTileValues(const InactiveTileValues<TreeType>&, tbb::split); | ||
| 1212 | inline void operator()(IterRange&); | ||
| 1213 | inline void join(const InactiveTileValues<TreeType>&); | ||
| 1214 | |||
| 1215 | private: | ||
| 1216 | SetType mInactiveValues; | ||
| 1217 | size_t mNumValues; | ||
| 1218 | }; | ||
| 1219 | |||
| 1220 | |||
| 1221 | template<typename TreeType> | ||
| 1222 | 6 | InactiveTileValues<TreeType>::InactiveTileValues(size_t numValues) | |
| 1223 | : mInactiveValues() | ||
| 1224 | 6 | , mNumValues(numValues) | |
| 1225 | { | ||
| 1226 | } | ||
| 1227 | |||
| 1228 | template <typename TreeType> | ||
| 1229 | inline | ||
| 1230 | 18 | InactiveTileValues<TreeType>::InactiveTileValues( | |
| 1231 | const InactiveTileValues<TreeType>& rhs, tbb::split) | ||
| 1232 | : mInactiveValues() | ||
| 1233 | 18 | , mNumValues(rhs.mNumValues) | |
| 1234 | { | ||
| 1235 | } | ||
| 1236 | |||
| 1237 | template<typename TreeType> | ||
| 1238 | void | ||
| 1239 | 6 | InactiveTileValues<TreeType>::runParallel(IterRange& range) | |
| 1240 | { | ||
| 1241 | 6 | tbb::parallel_reduce(range, *this); | |
| 1242 | } | ||
| 1243 | |||
| 1244 | |||
| 1245 | template<typename TreeType> | ||
| 1246 | void | ||
| 1247 | InactiveTileValues<TreeType>::runSerial(IterRange& range) | ||
| 1248 | { | ||
| 1249 | (*this)(range); | ||
| 1250 | } | ||
| 1251 | |||
| 1252 | |||
| 1253 | template<typename TreeType> | ||
| 1254 | inline void | ||
| 1255 | 1056 | InactiveTileValues<TreeType>::operator()(IterRange& range) | |
| 1256 | { | ||
| 1257 |
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221078 | for (; range && !thread::isGroupExecutionCancelled(); ++range) { |
| 1258 | 221078 | typename TreeType::ValueOffCIter iter = range.iterator(); | |
| 1259 |
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4073288938 | for (; iter; ++iter) { |
| 1260 | mInactiveValues.insert(iter.getValue()); | ||
| 1261 | } | ||
| 1262 | |||
| 1263 |
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221078 | if (mInactiveValues.size() > mNumValues) { |
| 1264 | ✗ | thread::cancelGroupExecution(); | |
| 1265 | } | ||
| 1266 | } | ||
| 1267 | } | ||
| 1268 | |||
| 1269 | template<typename TreeType> | ||
| 1270 | inline void | ||
| 1271 | 36 | InactiveTileValues<TreeType>::join(const InactiveTileValues<TreeType>& rhs) | |
| 1272 | { | ||
| 1273 | 36 | mInactiveValues.insert(rhs.mInactiveValues.begin(), rhs.mInactiveValues.end()); | |
| 1274 | } | ||
| 1275 | |||
| 1276 | template<typename TreeType> | ||
| 1277 | inline void | ||
| 1278 | 6 | InactiveTileValues<TreeType>::getInactiveValues(SetType& values) const | |
| 1279 | { | ||
| 1280 | 6 | values.insert(mInactiveValues.begin(), mInactiveValues.end()); | |
| 1281 | } | ||
| 1282 | |||
| 1283 | } // namespace diagnostics_internal | ||
| 1284 | |||
| 1285 | /// @endcond | ||
| 1286 | |||
| 1287 | //////////////////////////////////////// | ||
| 1288 | |||
| 1289 | |||
| 1290 | template<class GridType> | ||
| 1291 | bool | ||
| 1292 | 3 | uniqueInactiveValues(const GridType& grid, | |
| 1293 | std::vector<typename GridType::ValueType>& values, size_t numValues) | ||
| 1294 | { | ||
| 1295 | using TreeType = typename GridType::TreeType; | ||
| 1296 | using ValueType = typename GridType::ValueType; | ||
| 1297 | using SetType = std::set<ValueType>; | ||
| 1298 | |||
| 1299 | SetType uniqueValues; | ||
| 1300 | |||
| 1301 | { // Check inactive voxels | ||
| 1302 | TreeType& tree = const_cast<TreeType&>(grid.tree()); | ||
| 1303 | 6 | tree::LeafManager<TreeType> leafs(tree); | |
| 1304 | 3 | diagnostics_internal::InactiveVoxelValues<TreeType> voxelOp(leafs, numValues); | |
| 1305 | 3 | voxelOp.runParallel(); | |
| 1306 | 3 | voxelOp.getInactiveValues(uniqueValues); | |
| 1307 | } | ||
| 1308 | |||
| 1309 | // Check inactive tiles | ||
| 1310 | 3 | if (uniqueValues.size() <= numValues) { | |
| 1311 | 3 | typename TreeType::ValueOffCIter iter(grid.tree()); | |
| 1312 | 3 | iter.setMaxDepth(TreeType::ValueAllIter::LEAF_DEPTH - 1); | |
| 1313 | 3 | diagnostics_internal::InactiveTileValues<TreeType> tileOp(numValues); | |
| 1314 | |||
| 1315 | tree::IteratorRange<typename TreeType::ValueOffCIter> range(iter); | ||
| 1316 | 3 | tileOp.runParallel(range); | |
| 1317 | |||
| 1318 | 3 | tileOp.getInactiveValues(uniqueValues); | |
| 1319 | } | ||
| 1320 | |||
| 1321 | values.clear(); | ||
| 1322 | 3 | values.reserve(uniqueValues.size()); | |
| 1323 | |||
| 1324 | 3 | typename SetType::iterator it = uniqueValues.begin(); | |
| 1325 | 10 | for ( ; it != uniqueValues.end(); ++it) { | |
| 1326 | 7 | values.push_back(*it); | |
| 1327 | } | ||
| 1328 | |||
| 1329 | 3 | return values.size() <= numValues; | |
| 1330 | } | ||
| 1331 | |||
| 1332 | |||
| 1333 | //////////////////////////////////////// | ||
| 1334 | |||
| 1335 | |||
| 1336 | // Explicit Template Instantiation | ||
| 1337 | |||
| 1338 | #ifdef OPENVDB_USE_EXPLICIT_INSTANTIATION | ||
| 1339 | |||
| 1340 | #ifdef OPENVDB_INSTANTIATE_DIAGNOSTICS | ||
| 1341 | #include <openvdb/util/ExplicitInstantiation.h> | ||
| 1342 | #endif | ||
| 1343 | |||
| 1344 | #define _FUNCTION(TreeT) \ | ||
| 1345 | std::string checkLevelSet(const Grid<TreeT>&, size_t) | ||
| 1346 | OPENVDB_REAL_TREE_INSTANTIATE(_FUNCTION) | ||
| 1347 | #undef _FUNCTION | ||
| 1348 | |||
| 1349 | #define _FUNCTION(TreeT) \ | ||
| 1350 | std::string checkFogVolume(const Grid<TreeT>&, size_t) | ||
| 1351 | OPENVDB_REAL_TREE_INSTANTIATE(_FUNCTION) | ||
| 1352 | #undef _FUNCTION | ||
| 1353 | |||
| 1354 | #define _FUNCTION(TreeT) \ | ||
| 1355 | bool uniqueInactiveValues(const Grid<TreeT>&, std::vector<TreeT::ValueType>&, size_t) | ||
| 1356 | OPENVDB_VOLUME_TREE_INSTANTIATE(_FUNCTION) | ||
| 1357 | #undef _FUNCTION | ||
| 1358 | |||
| 1359 | #endif // OPENVDB_USE_EXPLICIT_INSTANTIATION | ||
| 1360 | |||
| 1361 | |||
| 1362 | } // namespace tools | ||
| 1363 | } // namespace OPENVDB_VERSION_NAME | ||
| 1364 | } // namespace openvdb | ||
| 1365 | |||
| 1366 | #endif // OPENVDB_TOOLS_DIAGNOSTICS_HAS_BEEN_INCLUDED | ||
| 1367 |